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  • DI PALMA, Decherchi, Pardo-Avila, Succi, Levitt, von Hejine, Cavalli. Probing interplays between human XBP1u translational arrest peptide and 80S ribosome. JCTC 2022, 18(3):1905–1914.

  • DI PALMA, Perot, Lauricella, Sterpone, Succi, Melchionna. Three-stage multiscale modelling of the NMDA neuroreceptor. Molecular Physics 2021, 119(19-20):e1928312. 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

  • DI PALMA, Daino, Ramaswamy, Corona, Frau, Fanunza, Vargiu, Tramontano, Ruggerone. Relevance of Ebola Virus VP35 homo-dimerization on the IFN cascade inhibition. Antiviral Chemistry & Chemotherapy 2019, 27: 2040206619889220.

  • Ramaswamy, DI PALMA, Vargiu, Corona, Piano, Ruggerone, Zinzula, Tramontano. Insights into the homo-oligomerization properties of N-terminal coiled-coil domain of Ebola virus VP35 protein. Virus Research 2018, 247, 61–70.

  • DI PALMA, Tramontano. Dynamics behind affinity maturation of an anti-HCMV antibody family influencing antigen binding. FEBS Letters 2017, 591:2936–2950.

  • Bottaro, DI PALMA, Bussi. Towards de novo RNA 3D structure prediction. RNA & Disease 2015, e544.

  • DI PALMA, Colizzi, Bussi. Using reweighted pulling simulations to characterize conformational changes in riboswitches. Methods in Enzymology 2015, 553:139-162.

  • DI PALMA, Bottaro, Bussi. Kissing loop interaction in adenine riboswitch: insights from
    umbrella sampling simulations.     BMC Bioinformatics 2015, 16(Suppl 9):S6.

  • Bottaro, DI PALMA, Bussi. The role of nucleobase interactions in RNA Structure and
    Dynamics.     NAR 2014, 42:13306-14.

  • DI PALMA, Colizzi, Bussi. Ligand-induced stabilization of the aptamer terminal helix in the adenine riboswitch. RNA 2013, 19:1517-24.

  • Falconi, Oteri, DI PALMA, Pandey, Battistoni, Desideri. Structural-dynamical investigation of the ZnuA histidine-rich loop: involvement in zinc management and transport.
    J Comput Aided Mol Des. 2011, 25:181-94.

Journal Publications

- Richard P. Feynman -

I think it's much more interesting to live not knowing than to have answers which might be wrong.

PUBLICATIONS

Conference Presentations

  • Selected Short Talk at the EMBO Conference 2021: Advances and Challenges in Biomolecular Simulations – 18-21 Oct 2021, Brno, CZ (virtual).

  • Poster presentation and Travel Award received at 31st ICAR – 11-15 Jun 2018 Porto, PT.

  • Oral Presentation at 255th ACS National Meeting (Division: Computers in Chemistry) – 18-22 March 2018, New Orleans, (LA) USA. 

  • Poster presentation at the 19th IUPAB and 11th EBSA Congress – 16-20 July 2017, Edinburgh, UK.

  • Poster presentation at the CCPN/CCPBioSim joint conference 2016 – 25-28 July 2016, University of Derby, Buxton, UK.

  • Oral presentation at the 4th CDDD Meeting – 24-26 Feb 2015 Angelini Research Center, Pomezia, IT.

  • Poster presentation at the RNA 2014 – The 19 th Annual Meeting of the RNA Society – 3-8 Jun 2014 Quebec City, (QC) CA.

  • Poster presentation at the 4th CDMC Symposium – Structure and Dynamics of RNA interactions –   1-2 Jun 2014 Montréal, (QC) CA.

  • Oral presentation at the BITS 2014, 11th Annual Meeting of the Bioinformatics Italian Society –    26-28 Feb 2014, Sapienza University of Rome, IT.

  • Poster presentation at the Biophysical Society 58th Annual Meeting – 15-19 Feb 2014 San Francisco, (CA) USA.

  • Poster presentation at the RNA 2013 – The 18th Annual Meeting of the RNA Society – 11-16 Jul 2013 Davos, CH.

  • Poster presentation at the Research workshop of the Israel Science Foundation - Computationa Biology: Then and Now – 6-9 May 2013 Weizmann Institute of science, Rehovot, IL.

  • Oral communication and Poster presentation at the 72nd Harden Conference – RNA regulators of gene expression – 22-25 July 2012 Robinson College, Cambridge, UK

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